Publications

2017 | 2016 | 2015 | 2014 | 2013 | 2012 | 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 1993-2001

2017

Stuart YE, Veen T, Weber JN, Hanson D, Ravinet M, Lohman BK, Thompson CJ, Tasneem T, Doggett A, Izen R, Ahmed N, Barrett RDH, Hendry AP, Peichel CL, Bolnick DI (2017) Contrasting effects of environment and genetics generate a continuum of parallel evolution. Nature Ecology & Evolution 1: 0158. 10.1038/s41559-017-0158

Peichel CL, Marques DA (2017) The genetic and molecular architecture of phenotypic diversity in sticklebacks. Philosophical Transactions of the Royal Society B: Biological Sciences 372: 20150486. 10.1098/rstb.2015.0486

Peichel CL (2017) Convergence and divergence in sex-chromosome evolution. Nature Genetics 49: 321-322. 10.1038/ng.3797

Peichel CL (2017) Chromosome evolution: molecular mechanisms and evolutionary consequences. Journal of Heredity 108:1-2. 10.1093/jhered/esw079

Peichel CL, ed (2017) AGA 2015: Chromosome Evolution. Journal of Heredity 108: issue 1. http://jhered.oxfordjournals.org/content/108/1.toc

Jiang Y, Peichel CL, Torrance L, Rizvi Z, Thompson S, Palivela VV, Pham H, Ling F, and Bolnick DI (2017) Sensory trait variation contributes to biased dispersal of threespine stickleback in flowing water. Journal of Evolutionary Biology 30: 681-695. 10.1111/jeb.13035

2016

Cech JN, Peichel CL (2016) Centromere inactivation on a neo-Y fusion chromosome in threespine stickleback fish. Chromosome Research 24: 437-450. 10.1007/s10577-016-9535-7

Greenwood AK, Mills MG, Wark AR, Archambeault SL, Peichel CL (2016) Evolution of schooling behavior in sticklebacks is shaped by the Eda gene. Genetics 203: 677-681. 10.1534/genetics.116.188342

Yong L, Peichel CL, McKinnon JS (2016) Genetic architecture of conspicuous red ornaments in female threespine stickleback. G3: Genes, Genomes, Genetics 6: 579-588. 10.1534/g3.115.024505

Oke KB, Bukhari M, Kaeuffer R, Rolshausen G, Rasanen K, Bolnick DI, Peichel CL, Hendry AP (2016) Does plasticity enhance or dampen phenotypic parallelism? A test with three lake-stream stickleback pairs. Journal of Evolutionary Biology 29: 126-143. 10.1111/jeb.12767

Hendry AP, Peichel CL (2016) Are conference special issues worthwhile? Evolutionary Ecology Research 17: 141-155.

Hendry AP, Peichel CL, eds (2016) Stickleback Behaviour & Evolution: Contributions from the Eighth International Stickleback Conference. Evolutionary Ecology Research 17: volumes 2-4.

2015

Conte GL, Arnegard ME, Best J, Chan YF, Jones FC, Kingsley DM, Schluter D, Peichel CL (2015) Extent of QTL reuse during repeated phenotypic divergence of sympatric threespine stickleback. Genetics 201: 1189-1200.10.1534/genetics.115.182550

Greenwood AK, Ardekani R, McCann SR, Dubin ME, Sullivan A, Bensussen S, Tavaré S, Peichel CL (2015) Genetic mapping of natural variation in schooling tendency in stickleback. G3: Genes, Genomes, Genetics 5: 761-769. 10.1534/g3.114.016519

Greenwood AK, Peichel CL (2015) Social regulation of gene expression in threespine sticklebacks. PLoS ONE 10: e0137726. 10.1371/journal.pone.0137726

Jiang Y, Torrance L, Peichel CL, Bolnick DI (2015) Differences in rheotactic responses contribute to divergent habitat use between parapatric lake and stream stickleback. Evolution 69: 2517-2524. 10.1111/evo.12740

Cech JN, Peichel CL (2015) Identification of the centromeric repeat in the threespine stickleback fish (Gasterosteus aculeatus). Chromosome Research 23: 767-779. 10.1007/s10577-015-9495-3

White MA, Kitano J, Peichel CL (2015) Purifying selection maintains dosage sensitive genes during degeneration of the threespine stickleback Y chromosome. Molecular Biology and Evolution 32: 1981-1995. 10.1093/molbev/msv078

Pennell MW, Kirkpatrick M, Otto SP, Vamosi JC, Peichel CL, Valenzuela N, Kitano J (2015) Y fuse? Sex chromosome fusions in fishes and reptiles. PLoS Genetics 11: e1005237. 10.1371/journal.pgen.1005237

2014

Arnegard ME, McGee MD, Matthews BW, Marchinko KB, Conte GL, Kabir S, Bedford N, Bergek S, Chan YF, Jones FC, Kingsley DM, Peichel CL*, Schluter D* (2014) Genetics of ecological divergence during speciation. Nature 511: 307-311. 10.1038/nature13301

Miller CT, Glazer AM, Summers BR, Blackman BK, Norman AR, Shapiro MD, Cole BL, Peichel CL, Schluter D, Kingsley D (2014) Modular skeletal evolution in sticklebacks is controlled by additive and clustered quantitative trait loci. Genetics 197: 405-420. 10.1534/genetics.114.162420

Mills MG, Greenwood AK, Peichel CL (2014) Pleiotropic effects of a single gene on skeletal development and sensory system patterning in sticklebacks. EvoDevo 5: 5. 10.1186/2041-9139-5-5

Yoshida K, Makino T, Yamaguchi K, Shigenobu S, Hasebe M, Kawata M, Kume M, Mori S, Peichel CL, Toyoda A, Fujiyama A, Kitano J (2014) Sex chromosome turnover contributes to genomic divergence between incipient stickleback species. PLoS Genetics 10: e1004223. 10.1371/journal.pgen.1004223

The Tree of Sex Consortium (2014) Tree of Sex: A database of sexual systems. Scientific Data 1: 140015. 10.1038/sdata.2014.15

Bachtrog D, Mank JE, Peichel CL, Kirkpatrick M, Otto SP, Ashman T-L, Hahn MW, Kitano J, Mayrose I, Ming R, Perrin N, Ross L, Valenzuela N, Vamosi J; Tree of Sex Consortium (2014) Sex determination – why so many ways of doing it? PLoS Biology 12: e1001899. 10.1371/journal.pbio.1001899

Jiggins C, Peichel C (2014) Speciation genetics and genomics. Oxford Bibliographies in Evolutionary Biology. September 29, 2014. 10.1093/OBO/9780199941728-0055

Seehausen O, Butlin RK, Keller I, Wagner CE, Boughman JW, Hohenlohe PA, Peichel CL, Saetre G-P, Bank C, Brännström A, Brelsford A, Clarkson CS, Eroukhmanoff F, Feder JL, Fischer MC, Foote AD, Franchini P, Jiggins CD, Jones FC, Lindholm AK, Lucek K, Maan ME, Marques DA, Martin SH, Matthews B, Meier JI, Möst M, Nachman MW, Nonaka E, Rennison DJ, Schwarzer J, Watson ET, Westram AM, and Widmer A (2014) Genomics and the origin of species. Nature Reviews Genetics 15: 176-192. 10.1038/nrg3644

2013

Greenwood AK*, Wark AR*, Yoshida K, Peichel CL (2013) Genetic and neural modularity underlie the evolution of schooling behavior in threespine sticklebacks. Current Biology 23: 1884-1888. 10.1016/j.cub.2013.07.058

Ardekani R, Greenwood AK, Peichel CL, Tavaré S (2013) Automated quantification of the schooling behavior of sticklebacks. EURASIP Journal on Image and Video Processing 2013: 61. 10.1186/1687-5281-2013-61

Hendry AP, Kaeuffer R, Crispo E, Peichel CL, Bolnick DI (2013) Evolutionary inferences from the analysis of exchangeability. Evolution 67: 3429-3441. 10.1111/evo.12160

Losos JB, Baum DA, Hoekstra HE, Lenski RE, Moore AJ, Peichel CL, Schluter D, Whitlock MC, eds (2013) The Princeton Guide to Evolution, Princeton University Press, Princeton NJ.

Peichel CL (2013) The genetics of phenotypic evolution. In The Princeton Guide to Evolution (J.B. Losos, D.A. Baum, H.E. Hoekstra, R.E. Lenski, A.J. Moore, C.L. Peichel, D. Schluter, M.C. Whitlock, eds), Princeton University Press, Princeton NJ, pp. 452-457.

Hendry AP, Peichel CL, eds (2013) Stickleback Behaviour & Evolution: Contributions from the Seventh International Conference. Evolutionary Ecology Research 15 (2-4): 111-502.

Hendry AP, Peichel CL, Matthews B, Boughman JW, Nosil P (2013) Stickleback research: the now and the next. Evolutionary Ecology Research 15: 111-141.

2012

Conte GL, Arnegard ME, Peichel CL, Schluter D (2012) The probability of genetic parallelism and convergence in natural populations. Proceedings of the Royal Society B: Biological Sciences 279: 5039-5047. 10.1098/rspb.2012.2146

Malek TB, Boughman JW, Dworkin I, Peichel CL (2012) Admixture mapping of male nuptial color and body shape in a recently formed hybrid population of threespine stickleback. Molecular Ecology 21: 5265-5279. 10.1111/j.1365-294X.2012.05660.x

Wark AR, Mills MG, Dang L, Chan YF, Jones FC, Brady SD, Absher DM, Grimwood J, Schmutz J, Myers RM, Kingsley DM, Peichel CL (2012) Genetic architecture of variation in the lateral line sensory system of threespine sticklebacks. G3: Genes, Genomes, Genetics 2: 1047-1056. 10.1534/g3.112.003079

Greenwood AK, Cech JN, Peichel CL (2012) Molecular and developmental contributions to divergent pigment patterns in marine and freshwater sticklebacks. Evolution and Development 144: 351-362. 10.1111/j.1525-142X.2012.00553.x

Kaeuffer R, Peichel CL, Bolnick DI, Hendry AP (2012) Parallel and non-parallel aspects of ecological, phenotypic, and genetic divergence across replicate population pairs of lake and stream stickleback. Evolution 66: 402-418. 10.1111/j.1558-5646.2011.01440.x

Kitano J, Mori S, Peichel CL (2012) Reduction of sexual dimorphism in stream-resident forms of threespine stickleback (Gasterosteus aculeatus L.) Journal of Fish Biology 80: 131-146. 10.1111/j.1095-8649.2011.03161.x

Kitano J, Peichel CL (2012) Turnover of sex chromosomes and speciation in fishes. Environmental Biology of Fishes 94: 549-558. 10.1007/s10641-011-9853-8

2011

Kitano J, Kawagishi Y, Mori S, Peichel CL, Makino T, Kawata M, Kusakabe M (2011) Divergence in sex steroid hormone signaling between sympatric species of Japanese threespine stickleback. PLoS ONE 6: e29253. 10.1371/journal.pone.0029253

Urton JR, McCann SM, Peichel CL (2011) Karyotype differentiation between two stickleback species (Gasterosteidae). Cytogenetic and Genome Research 135: 150-159. 10.1159/000331232

Greenwood AK, Jones FC, Chan YF, Brady SD, Absher DM, Grimwood J, Schmutz J, Myers RM, Kingsley DM, Peichel CL (2011) The genetic basis of divergent pigment patterns in juvenile threespine sticklebacks. Heredity 107: 155-166. 10.1038/hdy.2011.1

Wark AR*, Greenwood AK*, Taylor EM, Yoshida K, Peichel CL (2011) Heritable differences in schooling behavior among threespine stickleback populations revealed by a novel assay. PLoS ONE 6: e18316. 10.1371/journal.pone.0018316

Wark AR, Wark BJ, Lageson TJ, Peichel CL (2011) Novel methods for discriminating behavioral differences between stickleback individuals and populations in a laboratory shoaling assay. Behavioral Ecology and Sociobiology 65: 1147-1157. 10.1007/s00265-010-1130-x

Otto SP, Pannell JR, Peichel CL, Ashman TL, Charlesworth D, Chippindale AK, Delph LF, Guerrero RF, Scarpino SV, McAllister BF (2011) About PAR: The distinct evolutionary dynamics of the pseudoautosomal region. Trends in Genetics 27: 358-367. 10.1016/j.tig.2011.05.001

2010

Kitano J, Lema SC, Luckenbach JA, Mori S, Kawagishi Y, Kusakabe M, Swanson P, Peichel CL (2010) Adaptive divergence in the thyroid hormone pathway in the stickleback radiation. Current Biology 20: 2124-2130. 10.1016/j.cub.2010.10.050

Reid DT, Peichel CL (2010) Perspectives on the genetic architecture of divergence in body shape in sticklebacks. Integrative and Comparative Biology 50: 1057-1066. 10.1093/icb/icq030

Greenwood AK, Peichel CL, Zottoli SJ (2010) Distinct startle responses are associated with neuroanatomical differences in pufferfishes. Journal of Experimental Biology 213: 613-620. 10.1242/jeb.037085

Wark AR, Peichel CL (2010) Lateral line diversity among ecologically divergent threespine stickleback populations. Journal of Experimental Biology 213: 108-117. 10.1242/jeb.031625

Marshall Graves JA, Peichel CL (2010) Are homologies in vertebrate sex determination due to shared ancestry or limited options? Genome Biology 11: 205. 10.1186/gb-2010-11-4-205

2009

Kitano J, Ross JA, Mori S, Kume M, Jones FC, Chan YF, Absher DM, Grimwood J, Schmutz J, Myers RM, Kingsley DM, Peichel CL (2009) A role for a neo-sex chromosome in stickleback speciation. Nature 461: 1079-1083. 10.1038/nature08441

Ross JA, Urton JR, Boland J, Shapiro MD, Peichel CL (2009) Turnover of sex chromosomes in the stickleback fishes. PLoS Genetics 5: e1000391. 10.1371/journal.pgen.1000391

Hendry AP, Bolnick DI, Berner D, Peichel CL (2009) Along the speciation continuum in stickleback. Journal of Fish Biology 75: 2000-2036. 10.1111/j.1095-8649.2009.02419.x

2008

Ross JAPeichel CL (2008) Molecular cytogenetic evidence of rearrangements on the Y chromosome of the threespine stickleback fish. Genetics 179: 2173-2182. 10.1534/genetics.108.088559

Kitano J, Bolnick DI, Beauchamp DA, Mazur MM, Mori S, Nakano T, Peichel CL (2008) Reverse evolution of armor plates in the threespine stickleback. Current Biology 18: 769-774. 10.1016/j.cub.2008.04.027

Kitano J, Mori S, Peichel CL (2008) Divergence of male courtship displays between sympatric forms of anadromous threespine stickleback. Behaviour 145: 443-461. 10.1163/156853908792451430

2007

Gow JL, Peichel CL, Taylor EB (2007) Ecological selection against hybrids in natural populations of sympatric threespine sticklebacks. Journal of Evolutionary Biology 20: 2173-2180. 10.1111/j.1420-9101.2007.01427.x

Coyle SM, Huntingford FA, Peichel CL (2007) Parallel evolution of Pitx1 underlies pelvic reduction in Scottish threespine stickleback (Gasterosteus aculeatus). Journal of Heredity 98: 581-586. 10.1093/jhered/esm066

Kitano J, Mori S, Peichel CL (2007a) Phenotypic divergence and reproductive isolation between sympatric forms of Japanese threespine sticklebacks. Biological Journal of the Linnean Society 91: 671-685. 10.1111/j.1095-8312.2007.00824.x

Kitano J, Mori S, Peichel CL (2007b) Sexual dimorphism in the external morphology of the threespine stickleback. Copeia 2007(2): 336-349.

Streelman JT, Peichel CL, Parichy DM (2007) Developmental genetics of adaptation in fishes: the case for novelty. Annual Review of Ecology, Evolution, and Systematics 38: 655-681. 10.1146/annurev.ecolsys.38.091206.095537

Kingsley DM, Peichel CL (2007) The molecular genetics of evolutionary change in sticklebacks. In Biology of the Three-Spined Stickleback (S. Östlund-Nilsson, I. Mayer, and F. Huntingford, eds), CRC Press, Boca Raton, pp. 41-81.

2006

Gow JL, Peichel CL, Taylor, EB (2006) Contrasting hybridization rates between sympatric threespine sticklebacks highlight the fragility of reproductive barriers between evolutionarily young species. Molecular Ecology 15: 739-752. 10.1111/j.1365-294X.2006.02825.x

2005

Peichel CL (2005) Fishing for the secrets of vertebrate evolution in threespine sticklebacks. Developmental Dynamics 234: 815-823. 10.1002/dvdy.20564

2004

Peichel CL, Ross JA, Matson CK, Dickson M, Grimwood J, Schmutz J, Myers R, Mori S, Schluter D, Kingsley DM (2004) The master sex-determination locus in threespine sticklebacks is on a nascent Y chromosome. Current Biology 14: 1416-1424. 10.1016/j.cub.2004.08.030

Shapiro MD*, Marks ME*, Peichel CL*, Blackman BK, Nereng K, Jonsson B, Schluter D, Kingsley DM (2004) Genetic and developmental basis of evolutionary pelvic reduction in threespine sticklebacks. Nature 428: 717-723. 10.1038/nature02415

Colosimo PF*, Peichel CL*, Nereng K, Blackman BK, Shapiro MD, Schluter D, Kingsley DM (2004) The genetic architecture of parallel armor plate reduction in threespine sticklebacks. PLoS Biology 2: 0635-0641. 10.1371/journal.pbio.0020109

Kingsley D, Zhu B, Osoegawa K, deJong PJ, Schein J, Marra M, Peichel C, Amemiya C, Schluter D, Balabhadra S, Friedlander B, Cha YM, Dickson M, Grimwood J, Schmutz J, Talbot WS, Myers R (2004) New genomic tools for molecular studies of evolutionary change in sticklebacks. Behaviour 141: 1331-1344. 10.1163/1568539042948150

Peichel CL (2004) Notes from the Field: How a Molecular Geneticist Got Wet. Genesis 40: 146-150. 10.1002/gene.20076

Peichel CL (2004) The Origin of Species Revisited. Developmental Cell 7: 327-328. 10.1016/j.devcel.2004.08.013

Peichel CL (2004) Social Behavior: How Do Fish Find Their Shoal Mate? Current Biology 14: R503-504. 10.1016/j.cub.2004.06.037

2003

Peichel CL, Boughman JW (2003) Quick Guide to Sticklebacks. Current Biology 13: R942-R943. 10.1016/j.cub.2003.11.035

1993-2001

Peichel CL, Nereng KS, Ohgi KA, Cole BLE, Colosimo PF, Buerkle CA, Schluter D, Kingsley DM (2001) The genetic architecture of divergence between threespine stickleback species. Nature 414: 901-905. 10.1038/414901a

Spitz F, Gonzalez F, Peichel CL, Vogt TF, Duboule D, Zakany J (2001) Large scale transgenic and cluster deletion analysis of the HoxD complex separate an ancestral regulatory module from evolutionary innovations. Genes and Development 15: 2209-2214. 10.1101/gad.205701

Peichel CL, Kozak CA, Luyten FP, Vogt TF (1998) Evaluation of mouse Sfrp3/Frzb1 as a candidate for the lst, Ul, and Far mutants on Chromosome 2. Mammalian Genome 9: 385-387. 10.1007/s003359900775

Peichel CL, Prabhakaran B, Vogt TF (1997) The mouse Ulnaless mutation deregulates posterior HoxD gene expression and alters appendicular patterning. Development 124: 3481-3492. PMID: 9342041

Peichel CL, Abbott CM, Vogt TF (1996) Genetic and physical mapping of the mouse Ulnaless locus. Genetics 144: 1757-1767. PMCID: PMC1207725

Peichel CL, Vogt TF (1996) Genetic and molecular analysis of the mouse Ulnaless locus. Annals of the New York Academy of Sciences 785: 314-317. 10.1111/j.1749-6632.1996.tb56295.x

Dreger RT, Harris MJ, Peichel CL, Vogt TF, Juriloff DM (1995) The First arch (Far) mutation in mice recombines with Hoxd and Mdk. Mammalian Genome 6: 662-663. 10.1007/BF00352376

Peichel CL, Scherer SW, Tsui L-C, Beier DR, Vogt TF (1993) Mapping the midkine family of developmentally regulated signaling molecules. Mammalian Genome 4: 632-638. 10.1007/BF00360899

Skoda RC, Seldin DC, Chiang M-K, Peichel CL, Vogt TF, Leder P (1993) Murine c-mpl: a member of the hematopoietic growth factor receptor superfamily that transduces a proliferative signal. EMBO Journal 12(7): 2645-2653. PMCID: PMC413511